Scroll down for a searchable table of the 240 species included in the Zoonomia whole-genome alignment (project website is here)

OrderFamilyGenusSpeciesCommon nameIUCN StatusRepeat Annotated?NCBI Accession
AfrosoricidaChrysochloridaeChrysochlorisChrysochloris asiaticaCape golden moleLeast ConcernYesGCA_004027935.1
AfrosoricidaTenrecidaeEchinopsEchinops telfairiLesser hedgehog tenrecLeast ConcernYesGCF_000313985.1
AfrosoricidaTenrecidaeMicrogaleMicrogale talazaciTalazac's shrew tenrecLeast ConcernNoGCA_004026705.1
CarnivoraAiluridaeAilurusAilurus fulgensLesser pandaEndangeredYesGCA_002007465.1
CarnivoraCanidaeCanisCanis lupus familiarisDomestic dogLeast ConcernYesGCA_004027395.1
CarnivoraCanidaeCanisCanis lupus familiarisDomestic dogLeast ConcernYesGCF_000002285.3
CarnivoraCanidaeLycaonLycaon pictusAfrican hunting dogEndangeredYesGCA_001887905.1
CarnivoraCanidaeVulpesVulpes lagopusArctic foxLeast ConcernYesGCA_004023825.1
CarnivoraEupleridaeCryptoproctaCryptoprocta feroxFossaVulnerableYesGCA_004023885.1
CarnivoraFelidaeAcinonyxAcinonyx jubatusCheetahVulnerableYesGCF_001443585.1
CarnivoraFelidaeFelisFelis catusDomestic catLeast ConcernYesGCF_000181335.2
CarnivoraFelidaeFelisFelis nigripesBlack-footed catVulnerableYesGCA_004023925.1
CarnivoraFelidaePantheraPanthera oncaJaguarNear threatenedYesGCA_004023805.1
CarnivoraFelidaePantheraPanthera pardusLeopardVulnerableYesGCA_001857705.1
CarnivoraFelidaePantheraPanthera tigris altaicaAmur tigerEndangeredYesGCF_000464555.1
CarnivoraFelidaePumaPuma concolorPumaLeast ConcernYesGCF_003327715.1
CarnivoraHerpestidaeHelogaleHelogale parvulaDwarf mongooseLeast ConcernYesGCA_004023845.1
CarnivoraHerpestidaeMungosMungos mungoSouth African banded mongooseLeast ConcernYesGCA_004023785.1
CarnivoraHerpestidaeSuricataSuricata suricattaMeerkatLeast ConcernYesGCA_004023905.1
CarnivoraHyaenidaeHyaenaHyaena hyaenaStriped hyenaNear threatenedYesGCA_004023945.1
CarnivoraMephitidaeSpilogaleSpilogale gracilisWestern spotted skunkLeast ConcernYesGCA_004023965.1
CarnivoraMustelidaeEnhydraEnhydra lutris kenyoniSea otterEndangeredYesGCF_002288905.1
CarnivoraMustelidaeMellivoraMellivora capensisHoney badgerLeast ConcernYesGCA_004024625.1
CarnivoraMustelidaeMustelaMustela putorius furoDomestic ferretLeast ConcernYesGCF_000239315.1
CarnivoraMustelidaePteronuraPteronura brasiliensisGiant otterEndangeredYesGCA_004024605.1
CarnivoraOdobenidaeOdobenusOdobenus rosmarus divergensPacific walrusVulnerableYesGCF_000321225.1
CarnivoraOtariidaeZalophusZalophus californianusCalifornia sea lionLeast ConcernYesGCA_004024565.1
CarnivoraPhocidaeLeptonychotesLeptonychotes weddelliiWeddell sealLeast ConcernYesGCF_000349705.1
CarnivoraPhocidaeMiroungaMirounga angustirostrisNorthern elephant sealLeast ConcernYesGCA_004023865.1
CarnivoraPhocidaeNeomonachusNeomonachus schauinslandiHawaiian monk sealEndangeredYesGCA_002201575.1
CarnivoraUrsidaeAiluropodaAiluropoda melanoleucaGiant pandaVulnerableYesGCA_002007445.1
CarnivoraUrsidaeUrsusUrsus maritimusPolar bearVulnerableYesGCF_000687225.1
CarnivoraViverridaeParadoxurusParadoxurus hermaphroditusAsian palm civetLeast ConcernYesGCA_004024585.1
CetartiodactylaAntilocapridaeAntilocapraAntilocapra americanaPronghornLeast ConcernYesGCA_004027515.1
CetartiodactylaBalaenidaeEubalaenaEubalaena japonicaNorth pacific right whaleEndangeredYesGCA_004363455.1
CetartiodactylaBalaenopteridaeBalaenopteraBalaenoptera acutorostrata scammoniMinke whaleLeast ConcernNoGCF_000493695.1
CetartiodactylaBalaenopteridaeBalaenopteraBalaenoptera bonaerensisAntarctic minke whaleNear threatenedYesGCA_000978805.1
CetartiodactylaBovidaeAmmotragusAmmotragus lerviaAoudadVulnerableYesGCA_002201775.1
CetartiodactylaBovidaeBeatragusBeatragus hunteriHirolaCritically endangeredYesGCA_004027495.1
CetartiodactylaBovidaeBisonBison bison bisonAmerican bisonNear threatenedYesGCF_000754665.1
CetartiodactylaBovidaeBosBos indicusZebu cattleLeast ConcernYesGCA_000247795.2
CetartiodactylaBovidaeBosBos mutusWild yakVulnerableYesGCF_000298355.1
CetartiodactylaBovidaeBosBos taurusCattleLeast ConcernYesGCF_000003205.7
CetartiodactylaBovidaeBubalusBubalus bubalisWater buffaloLeast ConcernYesGCF_000471725.1
CetartiodactylaBovidaeCapraCapra aegagrusWild goatNear threatenedYesGCA_000978405.1
CetartiodactylaBovidaeCapraCapra hircusGoatLeast ConcernYesGCF_001704415.1
CetartiodactylaBovidaeHemitragusHemitragus hylocriusNilgiri tahrEndangeredYesGCA_004026825.1
CetartiodactylaBovidaeOvisOvis ariesSheepLeast ConcernYesGCF_000298735.2
CetartiodactylaBovidaeOvisOvis canadensis canadensisPeninsular bighorn sheepEndangeredYesGCA_004026945.1
CetartiodactylaBovidaePantholopsPantholops hodgsoniiChiruNear threatenedYesGCF_000400835.1
CetartiodactylaBovidaeSaigaSaiga tataricaSteppe saigaCritically endangeredYesGCA_004024985.1
CetartiodactylaCamelidaeCamelusCamelus bactrianusBactrian camelLeast ConcernYesGCF_000767855.1
CetartiodactylaCamelidaeCamelusCamelus dromedariusArabian camelLeast ConcernYesGCF_000767585.1
CetartiodactylaCamelidaeCamelusCamelus ferusWild bactrian camelCritically endangeredYesGCF_000311805.1
CetartiodactylaCamelidaeVicugnaVicugna pacos huacayaAlpacaYesGCA_000767525.1
CetartiodactylaCervidaeElaphurusElaphurus davidianusPere david's deerCritically endangeredYesGCA_002443075.1
CetartiodactylaCervidaeOdocoileusOdocoileus virginianus texanusWhite-tailed deerLeast ConcernNoGCA_002102435.1
CetartiodactylaCervidaeRangiferRangifer tarandusSiberian reindeerVulnerableYesGCA_004026565.1
CetartiodactylaDelphinidaeOrcinusOrcinus orcaKiller whaleData deficientYesGCF_000331955.2
CetartiodactylaDelphinidaeTursiopsTursiops truncatusBottlenose dolphinLeast ConcernYesGCA_001922835.1
CetartiodactylaEschrichtiidaeEschrichtiusEschrichtius robustusGrey whaleLeast ConcernYesGCA_004363415.1
CetartiodactylaGiraffidaeGiraffaGiraffa tippelskirchiGiraffeVulnerableYesGCA_001651235.1
CetartiodactylaGiraffidaeOkapiaOkapia johnstoniOkapiEndangeredYesGCA_001660835.1
CetartiodactylaHippopotamidaeHippopotamusHippopotamus amphibiusHippopotamusVulnerableYesGCA_004027065.1
CetartiodactylaIniidaeIniaInia geoffrensisAmazon river dolphinEndangeredYesGCA_004363515.1
CetartiodactylaIniidaeLipotesLipotes vexilliferYangtze river dolphinCritically endangeredYesGCF_000442215.1
CetartiodactylaMonodontidaeDelphinapterusDelphinapterus leucasBeluga whaleLeast ConcernYesGCF_002288925.1
CetartiodactylaMonodontidaeMonodonMonodon monocerosNarwhalLeast ConcernYesGCA_004026685.1
CetartiodactylaMoschidaeMoschusMoschus moschiferusSiberian musk deerVulnerableYesGCA_004024705.1
CetartiodactylaPhocoenidaeNeophocaenaNeophocaena asiaeorientalis asiaeorientalisYangtze finless porpoiseEndangeredYesGCA_003031525.1
CetartiodactylaPhocoenidaePhocoenaPhocoena phocoenaHarbor porpoiseLeast ConcernYesGCA_004363495.1
CetartiodactylaPhyseteridaeKogiaKogia brevicepsPygmy sperm whaleLeast ConcernYesGCA_004363705.1
CetartiodactylaPlatanistidaePlatanistaPlatanista minorIndus river dolphinEndangeredYesGCA_004363435.1
CetartiodactylaSuidaeSusSus scrofaPigLeast ConcernYesGCF_000003025.5
CetartiodactylaTayassuidaeCatagonusCatagonus wagneriChacoan peccaryEndangeredYesGCA_004024745.1
CetartiodactylaTragulidaeTragulusTragulus javanicusJava lesser chevrotainData deficientYesGCA_004024965.1
CetartiodactylaZiphiidaeMesoplodonMesoplodon bidensSowerby’s beaked whaleLeast ConcernYesGCA_004027085.1
CetartiodactylaZiphiidaeZiphiusZiphius cavirostrisCuvier's beaked whaleLeast ConcernYesGCA_004364475.1
ChiropteraCraseonycteridaeCraseonycterisCraseonycteris thonglongyaiBumblebee batNear threatenedYesGCA_004027555.1
ChiropteraHipposideridaeHipposiderosHipposideros armigerGreat roundleaf batLeast ConcernYesGCA_001890085.1
ChiropteraHipposideridaeHipposiderosHipposideros galeritusCantor's leaf-nosed batLeast ConcernYesGCA_004027415.1
ChiropteraMegadermatidaeMegadermaMegaderma lyraGreater false vampire batLeast ConcernYesGCA_004026885.1
ChiropteraMolossidaeTadaridaTadarida brasiliensisMexican free-tailed batLeast ConcernYesGCA_004025005.1
ChiropteraMormoopidaeMormoopsMormoops blainvilleiGhost-faced batLeast ConcernYesGCA_004026545.1
ChiropteraMormoopidaePteronotusPteronotus parnelliiParnell's mustached batLeast ConcernYesGCA_000465405.1
ChiropteraNoctilionidaeNoctilioNoctilio leporinusGreater bulldog batLeast ConcernYesGCA_004026585.1
ChiropteraPhyllostomidaeAnouraAnoura caudiferTailed tailless batLeast ConcernYesGCA_004027475.1
ChiropteraPhyllostomidaeArtibeusArtibeus jamaicensisJamacian fruit-eating batLeast ConcernYesGCA_004027435.1
ChiropteraPhyllostomidaeCarolliaCarollia perspicillataSeba's short-tailed batLeast ConcernYesGCA_004027735.1
ChiropteraPhyllostomidaeDesmodusDesmodus rotundusCommon vampire batLeast ConcernYesGCA_002940915.2
ChiropteraPhyllostomidaeMicronycterisMicronycteris hirsutaHairy big-eared batLeast ConcernYesGCA_004026765.1
ChiropteraPhyllostomidaeTonatiaTonatia saurophilaStripe-headed round-eared batLeast ConcernYesGCA_004024845.1
ChiropteraPteropodidaeEidolonEidolon helvumStraw-colored fruit batNear threatenedYesGCA_000465285.1
ChiropteraPteropodidaeMacroglossusMacroglossus sobrinusLong-tongued fruit batLeast ConcernYesGCA_004027375.1
ChiropteraPteropodidaePteropusPteropus alectoBlack flying foxLeast ConcernYesGCF_000325575.1
ChiropteraPteropodidaePteropusPteropus vampyrusLarge flying foxNear threatenedYesGCF_000151845.1
ChiropteraPteropodidaeRousettusRousettus aegyptiacusEgyptian fruit batLeast ConcernYesGCA_004024865.1
ChiropteraRhinolophidaeRhinolophusRhinolophus sinicusChinese rufous horseshoe batLeast ConcernYesGCA_001888835.1
ChiropteraVespertilionidaeEptesicusEptesicus fuscusBig brown batLeast ConcernYesGCF_000308155.1
ChiropteraVespertilionidaeLasiurusLasiurus borealisEastern red batLeast ConcernYesGCA_004026805.1
ChiropteraVespertilionidaeMiniopterusMiniopterus natalensisAtal long-fingered batLeast ConcernYesGCF_001595765.1
ChiropteraVespertilionidaeMiniopterusMiniopterus schreibersiiCommon bent-wing batVulnerableYesGCA_004026525.1
ChiropteraVespertilionidaeMurinaMurina aurata feaeAshy-gray tube-nosed batLeast ConcernYesGCA_004026665.1
ChiropteraVespertilionidaeMyotisMyotis brandtiiBrandt's batLeast ConcernYesGCF_000412655.1
ChiropteraVespertilionidaeMyotisMyotis davidiiDavid's myotisLeast ConcernYesGCF_000327345.1
ChiropteraVespertilionidaeMyotisMyotis lucifugusLittle brown batLeast ConcernYesGCF_000147115.1
ChiropteraVespertilionidaeMyotisMyotis myotisGreater mouse-eared batLeast ConcernYesGCA_004026985.1
ChiropteraVespertilionidaePipistrellusPipistrellus pipistrellusCommon pipistrelleLeast ConcernYesGCA_004026625.1
CingulataDasypodidaeChaetophractusChaetophractus vellerosusScreaming hairy armadilloLeast ConcernYesGCA_004027955.1
CingulataDasypodidaeDasypusDasypus novemcinctusNine-banded armadilloLeast ConcernYesGCF_000208655.1
CingulataDasypodidaeTolypeutesTolypeutes matacusSouthern three-banded armadilloNear threatenedYesGCA_004025125.1
DermopteraCynocephalidaeGaleopterusGaleopterus variegatusSunda flying lemurLeast ConcernYesGCA_004027255.1
EulipotyphlaErinaceidaeErinaceusErinaceus europaeusWestern european hedgehogLeast ConcernYesGCF_000296755.1
EulipotyphlaSolenodontidaeSolenodonSolenodon paradoxusHispaniolan solenodonLeast ConcernYesGCA_004363575.1
EulipotyphlaSoricidaeCrociduraCrocidura indochinensisIndochinese shrewLeast ConcernYesGCA_004027635.1
EulipotyphlaSoricidaeSorexSorex araneusCommon shrewLeast ConcernYesGCF_000181275.1
EulipotyphlaTalpidaeCondyluraCondylura cristataStar-nosed moleLeast ConcernYesGCF_000260355.1
EulipotyphlaTalpidaeScalopusScalopus aquaticusEastern moleLeast ConcernYesGCA_004024925.1
EulipotyphlaTalpidaeUropsilusUropsilus gracilisGracile shrew moleLeast ConcernYesGCA_004024945.1
HyracoideaProcaviidaeHeterohyraxHeterohyrax bruceiYellow- spotted rock hyraxLeast ConcernYesGCA_004026845.1
HyracoideaProcaviidaeProcaviaProcavia capensisRock hyraxLeast ConcernYesGCA_004026925.1
LagomorphaLeporidaeLepusLepus americanusSnowshoe hareLeast ConcernYesGCA_004026855.1
LagomorphaLeporidaeOryctolagusOryctolagus cuniculus cuniculusRabbitEndangeredYesGCF_000003625.3
LagomorphaOchotonidaeOchotonaOchotona princepsAmerican pikaLeast ConcernYesGCF_000292845.1
MacroscelideaMacroscelididaeElephantulusElephantulus edwardiiCape elephant shrewLeast ConcernYesGCA_004027355.1
PerissodactylaEquidaeEquusEquus asinus asinusDonkeyLeast ConcernYesGCF_001305755.1
PerissodactylaEquidaeEquusEquus caballusHorseLeast ConcernYesGCF_000002305.2
PerissodactylaEquidaeEquusEquus przewalskiiPrzewalski's horseEndangeredYesGCF_000696695.1
PerissodactylaRhinocerotidaeCeratotheriumCeratotherium simum cottoniNorthern white rhinocerosCritically endangeredYesGCA_004027795.1
PerissodactylaRhinocerotidaeCeratotheriumCeratotherium simum simumSouthern white rhinocerosNear threatenedYesGCF_000283155.1
PerissodactylaRhinocerotidaeDicerorhinusDicerorhinus sumatrensis sumatrensisSumatran rhinocerosCritically endangeredYesGCA_002844835.1
PerissodactylaRhinocerotidaeDicerosDiceros bicornisBlack rhinocerosCritically endangeredYesGCA_004027315.1
PerissodactylaTapiridaeTapirusTapirus indicusMalayan tapirEndangeredYesGCA_004024905.1
PerissodactylaTapiridaeTapirusTapirus terrestrisSouth american tapirVulnerableYesGCA_004025025.1
PholidotaManidaeManisManis javanicaMalayan pangolinCritically endangeredNoGCF_001685135.1
PholidotaManidaeManisManis pentadactylaChinese pangolinCritically endangeredYesGCA_000738955.1
PilosaMegalonychidaeCholoepusCholoepus didactylusLinnaeus’s two-toed slothLeast ConcernYesGCA_004027855.1
PilosaMegalonychidaeCholoepusCholoepus hoffmanniHoffmann’s two-toed slothLeast ConcernYesGCA_000164785.2
PilosaMyrmecophagidaeMyrmecophagaMyrmecophaga tridactylaGiant anteaterVulnerableYesGCA_004026745.1
PilosaMyrmecophagidaeTamanduaTamandua tetradactylaSouthern tamanduaLeast ConcernYesGCA_004025105.1
PrimatesAotidaeAotusAotus nancymaaeNancy ma’s night monkeyVulnerableYesGCA_000952055.2
PrimatesAtelidaeAlouattaAlouatta palliataMantled howlerEndangeredYesGCA_004027835.1
PrimatesAtelidaeAtelesAteles geoffroyiGeoffroy's spider monkeyEndangeredYesGCA_004024785.1
PrimatesCebidaeCallithrixCallithrix jacchusCommon marmosetLeast ConcernYesGCA_002754865.1
PrimatesCebidaeCebusCebus albifronsWhite-fronted capuchinLeast ConcernYesGCA_004027755.1
PrimatesCebidaeCebusCebus capucinus imitatorWhite-faced sapajouVulnerableNoGCF_001604975.1
PrimatesCebidaeSaguinusSaguinus imperatorEmperor tamarinLeast ConcernYesGCA_004024885.1
PrimatesCebidaeSaimiriSaimiri boliviensis boliviensisBolivian squirrel monkeyLeast ConcernYesGCF_000235385.1
PrimatesCercopithecidaeCercocebusCercocebus atysSooty mangabeyVulnerableYesGCF_000955945.1
PrimatesCercopithecidaeCercopithecusCercopithecus neglectusDe brazza's monkeyLeast ConcernYesGCA_004027615.1
PrimatesCercopithecidaeChlorocebusChlorocebus sabaeusGreen monkeyLeast ConcernYesGCF_000409795.2
PrimatesCercopithecidaeColobusColobus angolensis palliatusAngolan colobusVulnerableYesGCF_000951035.1
PrimatesCercopithecidaeErythrocebusErythrocebus patasPatas monkeyNear threatenedYesGCA_004027335.1
PrimatesCercopithecidaeMacacaMacaca fascicularisCrab-eating macaqueVulnerableYesGCF_000364345.1
PrimatesCercopithecidaeMacacaMacaca mulattaRhesus monkeyLeast ConcernYesGCF_000772875.2
PrimatesCercopithecidaeMacacaMacaca nemestrinaSouthern pig-tailed macaqueVulnerableYesGCF_000956065.1
PrimatesCercopithecidaeMandrillusMandrillus leucophaeusDrillEndangeredYesGCF_000951045.1
PrimatesCercopithecidaeNasalisNasalis larvatusProboscis monkeyEndangeredYesGCA_004027105.1
PrimatesCercopithecidaePapioPapio anubisOlive baboonLeast ConcernYesGCA_000264685.2
PrimatesCercopithecidaePiliocolobusPiliocolobus tephroscelesUgandan red colobusEndangeredYesGCA_002776525.1
PrimatesCercopithecidaePygathrixPygathrix nemaeusRed-shanked douc langurCritically endangeredYesGCA_004024825.1
PrimatesCercopithecidaeRhinopithecusRhinopithecus bietiBlack snub-nosed monkeyEndangeredYesGCF_001698545.1
PrimatesCercopithecidaeRhinopithecusRhinopithecus roxellanaGolden snub-nosed monkeyEndangeredYesGCF_000769185.1
PrimatesCercopithecidaeSemnopithecusSemnopithecus entellusNorthern plains gray langurLeast ConcernYesGCA_004025065.1
PrimatesCheirogaleidaeCheirogaleusCheirogaleus mediusFat-tailed dwarf lemurVulnerableYesGCA_004024725.1
PrimatesCheirogaleidaeMicrocebusMicrocebus murinusGray mouse lemurLeast ConcernYesGCA_000165445.3
PrimatesCheirogaleidaeMirzaMirza coquereliCoquerel's giant mouse lemurEndangeredYesGCA_004024645.1
PrimatesDaubentoniidaeDaubentoniaDaubentonia madagascariensisAye-ayeEndangeredYesGCA_004027145.1
PrimatesGalagidaeOtolemurOtolemur garnettiiSmall-eared galagoLeast ConcernYesGCF_000181295.1
PrimatesHominidaeGorillaGorilla gorilla gorillaWestern lowland gorillaCritically endangeredYesGCA_900006655.3
PrimatesHominidaeHomoHomo sapiensHumanLeast ConcernYesGCA_000001405.27
PrimatesHominidaePanPan paniscusBonoboEndangeredYesGCF_000258655.2
PrimatesHominidaePanPan troglodytesChimpanzeeEndangeredYesGCA_002880755.3
PrimatesHominidaePongoPongo abeliiSumatran orangutanCritically endangeredYesGCA_002880775.3
PrimatesHylobatidaeNomascusNomascus leucogenysNorthern white-cheeked gibbonCritically endangeredYesGCF_000146795.2
PrimatesIndridaeIndriIndri indriIndriCritically endangeredYesGCA_004363605.1
PrimatesIndridaePropithecusPropithecus coquereliCoquerel's sifakaCritically endangeredYesGCF_000956105.1
PrimatesLemuridaeEulemurEulemur flavifronsSclater's lemurCritically endangeredYesGCA_001262665.1
PrimatesLemuridaeEulemurEulemur fulvusCommon brown lemurVulnerableYesGCA_004027275.1
PrimatesLemuridaeLemurLemur cattaRing tailed lemurEndangeredYesGCA_004024665.1
PrimatesLorisidaeNycticebusNycticebus coucangSunda slow lorisEndangeredYesGCA_004027815.1
PrimatesPitheciidaePitheciaPithecia pitheciaWhite-faced sakiLeast ConcernYesGCA_004026645.1
PrimatesPitheciidaePlecturocebusPlecturocebus donacophilusWhite-eared titiLeast ConcernYesGCA_004027715.1
ProboscideaElephantidaeLoxodontaLoxodonta africanaAfrican savanna elephantEndangeredYesGCF_000001905.1
RodentiaAplodontiidaeAplodontiaAplodontia rufaMountain beaverLeast ConcernYesGCA_004027875.1
RodentiaBathyergidaeFukomysFukomys damarensisDamara mole-ratLeast ConcernYesGCF_000743615.1
RodentiaBathyergidaeHeterocephalusHeterocephalus glaberNaked mole-ratLeast ConcernYesGCF_000247695.1
RodentiaCapromyidaeCapromysCapromys piloridesDesmarest's hutiaLeast ConcernYesGCA_004027915.1
RodentiaCastoridaeCastorCastor canadensisNorth american beaverLeast ConcernYesGCA_004027675.1
RodentiaCaviidaeCaviaCavia apereaBrazilian guinea pigLeast ConcernNoGCA_000688575.1
RodentiaCaviidaeCaviaCavia porcellusDomestic guinea pigLeast ConcernYesGCF_000151735.1
RodentiaCaviidaeCaviaCavia tschudiiMontane guinea pigLeast ConcernYesGCA_004027695.1
RodentiaCaviidaeDolichotisDolichotis patagonumPatagonian maraNear threatenedYesGCA_004027295.1
RodentiaCaviidaeHydrochoerusHydrochoerus hydrochaerisCapybaraLeast ConcernYesGCA_004027455.1
RodentiaChinchillidaeChinchillaChinchilla lanigeraLong-tailed chinchillaEndangeredYesGCF_000276665.1
RodentiaCricetidaeEllobiusEllobius lutescensTranscaucasian mole voleLeast ConcernYesGCA_001685075.1
RodentiaCricetidaeEllobiusEllobius talpinusNorthern mole voleLeast ConcernYesGCA_001685095.1
RodentiaCricetidaeMesocricetusMesocricetus auratusGolden hamsterVulnerableYesGCF_000349665.1
RodentiaCricetidaeMicrotusMicrotus ochrogasterPrairie voleLeast ConcernYesGCF_000317375.1
RodentiaCricetidaeOndatraOndatra zibethicusMuskratLeast ConcernYesGCA_004026605.1
RodentiaCricetidaeOnychomysOnychomys torridusScorpion mouseLeast ConcernYesGCA_004026725.1
RodentiaCricetidaePeromyscusPeromyscus maniculatus bairdiiPrairie deer mouseLeast ConcernYesGCF_000500345.1
RodentiaCricetidaeSigmodonSigmodon hispidusHispid cotton ratLeast ConcernYesGCA_004025045.1
RodentiaCtenodactylidaeCtenodactylusCtenodactylus gundiCommon gundiLeast ConcernYesGCA_004027205.1
RodentiaCtenomyidaeCtenomysCtenomys sociabilisSocial tuco-tucoCritically endangeredYesGCA_004027165.1
RodentiaCuniculidaeCuniculusCuniculus pacaLowland pacaLeast ConcernYesGCA_004365215.1
RodentiaDasyproctidaeDasyproctaDasyprocta punctataCentral american agoutiLeast ConcernYesGCA_004363535.1
RodentiaDinomyidaeDinomysDinomys branickiiPacaranaLeast ConcernYesGCA_004027595.1
RodentiaDipodidaeAllactagaAllactaga bullataGobi jerboaLeast ConcernYesGCA_004027895.1
RodentiaDipodidaeJaculusJaculus jaculusLesser egyptian jerboaLeast ConcernNoGCF_000280705.1
RodentiaDipodidaeZapusZapus hudsoniusMeadow jumping mouseLeast ConcernYesGCA_004024765.1
RodentiaGliridaeGlisGlis glisEdible dormouseLeast ConcernYesGCA_004027185.1
RodentiaGliridaeGraphiurusGraphiurus murinusWoodland doormouseLeast ConcernYesGCA_004027655.1
RodentiaGliridaeMuscardinusMuscardinus avellanariusHazel dormouseLeast ConcernYesGCA_004027005.1
RodentiaHeteromyidaeDipodomysDipodomys ordiiOrd's kangaroo ratLeast ConcernYesGCF_000151885.1
RodentiaHeteromyidaeDipodomysDipodomys stephensiStephen's kangaroo ratVulnerableYesGCA_004024685.1
RodentiaHeteromyidaePerognathusPerognathus longimembris pacificusPacific pocket mouseEndangeredYesGCA_004363475.1
RodentiaHystricidaeHystrixHystrix cristataCrested porcupineLeast ConcernYesGCA_004026905.1
RodentiaMuridaeAcomysAcomys cahirinusCairo spiny mouseLeast ConcernYesGCA_004027535.1
RodentiaMuridaeMerionesMeriones unguiculatusMongolian jirdLeast ConcernYesGCA_004026785.1
RodentiaMuridaeMusMus caroliRyukyu mouseLeast ConcernYesGCA_900094665.2
RodentiaMuridaeMusMus musculusHouse mouseLeast ConcernYesGCF_000001635.26
RodentiaMuridaeMusMus pahariShrew mouseLeast ConcernYesGCA_900095145.2
RodentiaMuridaeMusMus spretusWestern mediterranean mouseLeast ConcernYesGCA_001624865.1
RodentiaMuridaePsammomysPsammomys obesusFat sand ratLeast ConcernYesGCA_002215935.1
RodentiaMuridaeRattusRattus norvegicusBrown ratLeast ConcernYesGCF_000001895.5
RodentiaMyocastoridaeMyocastorMyocastor coypusCoypuLeast ConcernYesGCA_004027025.1
RodentiaNesomyidaeCricetomysCricetomys gambianusGambian pouched ratLeast ConcernYesGCA_004027575.1
RodentiaNesomyidaeCricetulusCricetulus griseusChinese hamsterLeast ConcernYesGCA_900186095.1
RodentiaOctodontidaeOctodonOctodon degusDeguLeast ConcernYesGCF_000260255.1
RodentiaPetromuridaePetromusPetromus typicusDassie ratLeast ConcernYesGCA_004026965.1
RodentiaSciuridaeIctidomysIctidomys tridecemlineatusThirteen-lined ground squirrelLeast ConcernYesGCF_000236235.1
RodentiaSciuridaeMarmotaMarmota marmota marmotaAlpine marmotLeast ConcernYesGCF_001458135.1
RodentiaSciuridaeSpermophilusSpermophilus dauricusDaurian ground squirrelLeast ConcernYesGCA_002406435.1
RodentiaSciuridaeXerusXerus inaurisCape ground squirrelLeast ConcernYesGCA_004024805.1
RodentiaSpalacidaeNannospalaxNannospalax galiliUpper galilee mountains blind mole ratData deficientYesGCF_000622305.1
RodentiaThryonomyidaeThryonomysThryonomys swinderianusGreater cane ratLeast ConcernYesGCA_004025085.1
ScandentiaTupaiidaeTupaiaTupaia chinensisNorthern tree shrewLeast ConcernYesGCF_000334495.1
ScandentiaTupaiidaeTupaiaTupaia tanaLarge treeshrewLeast ConcernYesGCA_004365275.1
SireniaTrichechidaeTrichechusTrichechus manatus latirostrisFlorida manateeEndangeredYesGCF_000243295.1
TubulidentataOrycteropodidaeOrycteropusOrycteropus afer aferAardvarkLeast ConcernYesGCA_004365145.1