The Zoonomia comparative genomics project includes genome assemblies for over 200 species. More information on the project, including data resources, can be found at zoonomiaproject.org
The details of the project are described in our open-access Nature paper
| Order | Family | Species | Common Name | Source | Accession | IUCN |
|---|---|---|---|---|---|---|
| AFROSORICIDA | Chrysochloridae | Chrysochloris asiatica | Cape golden mole | 1. Zoonomia | GCA_004027935.1 | LC |
| AFROSORICIDA | Tenrecidae | Echinops telfairi | Small madagascar hedgehog | 2. Existing assembly | GCF_000313985.1 | LC |
| AFROSORICIDA | Tenrecidae | Microgale talazaci | Talazac's shrew tenrec | 1. Zoonomia | GCA_004026705.1 | LC |
| CARNIVORA | Ailuridae | Ailurus fulgens | Lesser panda | 2. Existing assembly | GCA_002007465.1 | EN |
| CARNIVORA | Canidae | Canis lupus familiaris | Domestic dog (village dog) | 1. Zoonomia | GCA_004027395.1 | LC |
| CARNIVORA | Canidae | Canis lupus familiaris | Domestic dog | 2. Existing assembly | GCF_000002285.3 | LC |
| CARNIVORA | Canidae | Lycaon pictus | African hunting dog | 2. Existing assembly | GCA_001887905.1 | EN |
| CARNIVORA | Canidae | Vulpes lagopus | Arctic fox | 1. Zoonomia | GCA_004023825.1 | LC |
| CARNIVORA | Eupleridae | Cryptoprocta ferox | Fossa | 1. Zoonomia | GCA_004023885.1 | VU |
| CARNIVORA | Felidae | Acinonyx jubatus | Cheetah | 2. Existing assembly | GCF_001443585.1 | CR |
| CARNIVORA | Felidae | Felis catus | Domestic cat | 2. Existing assembly | GCF_000181335.2 | LC |
| CARNIVORA | Felidae | Felis nigripes | Black-footed cat | 1. Zoonomia | GCA_004023925.1 | VU |
| CARNIVORA | Felidae | Panthera onca | Jaguar | 1. Zoonomia | GCA_004023805.1 | NT |
| CARNIVORA | Felidae | Panthera pardus | Leopard | 2. Existing assembly | GCA_001857705.1 | VU |
| CARNIVORA | Felidae | Panthera tigris | Amur tiger | 2. Existing assembly | GCF_000464555.1 | EN |
| CARNIVORA | Felidae | Puma concolor | Puma | 2. Existing assembly | GCF_003327715.1 | LC |
| CARNIVORA | Herpestidae | Helogale parvula | Dwarf mongoose | 1. Zoonomia | GCA_004023845.1 | LC |
| CARNIVORA | Herpestidae | Mungos mungo | South African banded mongoose | 1. Zoonomia | GCA_004023785.1 | LC |
| CARNIVORA | Herpestidae | Suricata suricatta | Meerkat | 1. Zoonomia | GCA_004023905.1 | LC |
| CARNIVORA | Hyaenidae | Hyaena hyaena | Striped hyena | 1. Zoonomia | GCA_004023945.1 | NT |
| CARNIVORA | Mephitidae | Spilogale gracilis | Western spotted skunk | 1. Zoonomia | GCA_004023965.1 | LC |
| CARNIVORA | Mustelidae | Enhydra lutris | Sea otter | 2. Existing assembly | GCF_002288905.1 | EN |
| CARNIVORA | Mustelidae | Mellivora capensis | Honey badger | 1. Zoonomia | GCA_004024625.1 | LC |
| CARNIVORA | Mustelidae | Mustela putorius | Domestic ferret | 2. Existing assembly | GCF_000239315.1 | LC |
| CARNIVORA | Mustelidae | Pteronura brasiliensis | Giant otter | 1. Zoonomia | GCA_004024605.1 | EN |
| CARNIVORA | Odobenidae | Odobenus rosmarus | Pacific walrus | 2. Existing assembly | GCF_000321225.1 | DD |
| CARNIVORA | Otariidae | Zalophus californianus | California sea lion | 1. Zoonomia | GCA_004024565.1 | LC |
| CARNIVORA | Phocidae | Leptonychotes weddellii | Weddell seal | 2. Existing assembly | GCF_000349705.1 | LC |
| CARNIVORA | Phocidae | Mirounga angustirostris | Northern elephant seal | 1. Zoonomia | GCA_004023865.1 | LC |
| CARNIVORA | Phocidae | Neomonachus schauinslandi | Hawaiian monk seal | 2. Existing assembly | GCA_002201575.1 | EN |
| CARNIVORA | Ursidae | Ailuropoda melanoleuca | Giant panda | 2. Existing assembly | GCA_002007445.1 | VU |
| CARNIVORA | Ursidae | Ursus maritimus | Polar bear | 2. Existing assembly | GCF_000687225.1 | VU |
| CARNIVORA | Viverridae | Paradoxurus hermaphroditus | Asian palm civet | 1. Zoonomia | GCA_004024585.1 | LC |
| CETARTIODACTYLA | Antilocapridae | Antilocapra americana | Pronghorn | 1. Zoonomia | GCA_004027515.1 | LC |
| CETARTIODACTYLA | Balaenidae | Eubalaena japonica | North Pacific right whale | 1. Zoonomia | GCA_004363455.1 | EN |
| CETARTIODACTYLA | Balaenopteridae | Balaenoptera acutorostrata | Minke whale | 2. Existing assembly | GCF_000493695.1 | LC |
| CETARTIODACTYLA | Balaenopteridae | Balaenoptera bonaerensis | Antarctic minke whale | 2. Existing assembly | GCA_000978805.1 | DD |
| CETARTIODACTYLA | Bovidae | Ammotragus lervia | Aoudad | 2. Existing assembly | GCA_002201775.1 | VU |
| CETARTIODACTYLA | Bovidae | Beatragus hunteri | Hirola | 1. Zoonomia | GCA_004027495.1 | CR |
| CETARTIODACTYLA | Bovidae | Bison bison | American bison | 2. Existing assembly | GCF_000754665.1 | NT |
| CETARTIODACTYLA | Bovidae | Bos indicus | Zebu cattle | 2. Existing assembly | GCA_000247795.2 | LC |
| CETARTIODACTYLA | Bovidae | Bos mutus | Wild yak | 2. Existing assembly | GCF_000298355.1 | VU |
| CETARTIODACTYLA | Bovidae | Bos taurus | Cattle | 2. Existing assembly | GCF_000003205.7 | LC |
| CETARTIODACTYLA | Bovidae | Bubalus bubalis | Water buffalo | 2. Existing assembly | GCF_000471725.1 | LC |
| CETARTIODACTYLA | Bovidae | Capra aegagrus | Wild goat | 2. Existing assembly | GCA_000978405.1 | VU |
| CETARTIODACTYLA | Bovidae | Capra hircus | Goat | 2. Existing assembly | GCF_001704415.1 | LC |
| CETARTIODACTYLA | Bovidae | Hemitragus hylocrius | Nilgiri tahr | 1. Zoonomia | GCA_004026825.1 | EN |
| CETARTIODACTYLA | Bovidae | Ovis aries | Sheep | 2. Existing assembly | GCF_000298735.2 | LC |
| CETARTIODACTYLA | Bovidae | Ovis canadensis cremnobates | Peninsular bighorn sheep | 1. Zoonomia | GCA_004026945.1 | EN |
| CETARTIODACTYLA | Bovidae | Pantholops hodgsonii | Chiru | 2. Existing assembly | GCF_000400835.1 | NT |
| CETARTIODACTYLA | Bovidae | Saiga tatarica tatarica | Russian saiga | 1. Zoonomia | GCA_004024985.1 | CR |
| CETARTIODACTYLA | Camelidae | Camelus bactrianus | Bactrian camel | 2. Existing assembly | GCF_000767855.1 | LC |
| CETARTIODACTYLA | Camelidae | Camelus dromedarius | Arabian camel | 2. Existing assembly | GCF_000767585.1 | LC |
| CETARTIODACTYLA | Camelidae | Camelus ferus | Wild bactrian camel | 2. Existing assembly | GCF_000311805.1 | CR |
| CETARTIODACTYLA | Camelidae | Vicugna pacos | Alpaca | 2. Existing assembly | GCA_000767525.1 | LC |
| CETARTIODACTYLA | Cervidae | Elaphurus davidianus | Pere david's deer | 2. Existing assembly | GCA_002443075.1 | CR |
| CETARTIODACTYLA | Cervidae | Odocoileus virginianus | White-tailed deer | 2. Existing assembly | GCA_002102435.1 | LC |
| CETARTIODACTYLA | Cervidae | Rangifer tarandus | Siberian reindeer | 1. Zoonomia | GCA_004026565.1 | VU |
| CETARTIODACTYLA | Delphinidae | Orcinus orca | Killer whale | 2. Existing assembly | GCF_000331955.2 | DD |
| CETARTIODACTYLA | Delphinidae | Tursiops truncatus | Bottlenose dolphin | 2. Existing assembly | GCA_001922835.1 | LC |
| CETARTIODACTYLA | Eschrichtiidae | Eschrichtius robustus | Grey whale | 1. Zoonomia | GCA_004363415.1 | LC |
| CETARTIODACTYLA | Giraffidae | Giraffa tippelskirchi | Giraffe | 2. Existing assembly | GCA_001651235.1 | VU |
| CETARTIODACTYLA | Giraffidae | Okapia johnstoni | Okapi | 2. Existing assembly | GCA_001660835.1 | EN |
| CETARTIODACTYLA | Hippopotamidae | Hippopotamus amphibius | Hippopotamus | 1. Zoonomia | GCA_004027065.1 | VU |
| CETARTIODACTYLA | Iniidae | Inia geoffrensis | Amazon river dolphin | 1. Zoonomia | GCA_004363515.1 | DD |
| CETARTIODACTYLA | Iniidae | Lipotes vexillifer | Yangtze river dolphin | 2. Existing assembly | GCF_000442215.1 | CR |
| CETARTIODACTYLA | Monodontidae | Delphinapterus leucas | Beluga whale | 2. Existing assembly | GCF_002288925.1 | LC |
| CETARTIODACTYLA | Monodontidae | Monodon monoceros | Narwhal | 1. Zoonomia | GCA_004026685.1 | LC |
| CETARTIODACTYLA | Moschidae | Moschus moschiferus | Siberian musk deer | 1. Zoonomia | GCA_004024705.1 | VU |
| CETARTIODACTYLA | Phocoenidae | Neophocaena asiaeorientalis | Yangtze finless porpoise | 2. Existing assembly | GCA_003031525.1 | EN |
| CETARTIODACTYLA | Phocoenidae | Phocoena phocoena | Harbor porpoise | 1. Zoonomia | GCA_004363495.1 | LC |
| CETARTIODACTYLA | Physeteridae | Kogia breviceps | Pygmy sperm whale | 1. Zoonomia | GCA_004363705.1 | DD |
| CETARTIODACTYLA | Platanistidae | Platanista gangetica minor | Indus river dolphin | 1. Zoonomia | GCA_004363435.1 | EN |
| CETARTIODACTYLA | Suidae | Sus scrofa | Pig | 2. Existing assembly | GCF_000003025.5 | LC |
| CETARTIODACTYLA | Tayassuidae | Catagonus wagneri | Chacoan peccary | 1. Zoonomia | GCA_004024745.1 | EN |
| CETARTIODACTYLA | Tragulidae | Tragulus javanicus | Java lesser chevrotain | 1. Zoonomia | GCA_004024965.1 | DD |
| CETARTIODACTYLA | Ziphiidae | Mesoplodon bidens | Sowerby’s beaked whale | 1. Zoonomia | GCA_004027085.1 | DD |
| CETARTIODACTYLA | Ziphiidae | Ziphius cavirostris | Cuvier's beaked whale | 1. Zoonomia | GCA_004364475.1 | LC |
| CHIROPTERA | Craseonycteridae | Craseonycteris thonglongyai | Bumblebee bat | 1. Zoonomia | GCA_004027555.1 | VU |
| CHIROPTERA | Hipposideridae | Hipposideros armiger | Great roundleaf bat | 2. Existing assembly | GCA_001890085.1 | LC |
| CHIROPTERA | Hipposideridae | Hipposideros galeritus | Cantor's leaf-nosed bat | 1. Zoonomia | GCA_004027415.1 | LC |
| CHIROPTERA | Megadermatidae | Megaderma lyra | Greater false vampire bat | 1. Zoonomia | GCA_004026885.1 | LC |
| CHIROPTERA | Molossidae | Tadarida brasiliensis | Mexican free-tailed bat | 1. Zoonomia | GCA_004025005.1 | LC |
| CHIROPTERA | Mormoopidae | Mormoops blainvillei | Ghost-faced bat | 1. Zoonomia | GCA_004026545.1 | LC |
| CHIROPTERA | Mormoopidae | Pteronotus parnellii | Parnell's mustached bat | 2. Existing assembly | GCA_000465405.1 | LC |
| CHIROPTERA | Noctilionidae | Noctilio leporinus | Greater bulldog bat | 1. Zoonomia | GCA_004026585.1 | LC |
| CHIROPTERA | Phyllostomidae | Anoura caudifer | Tailed tailless bat | 1. Zoonomia | GCA_004027475.1 | LC |
| CHIROPTERA | Phyllostomidae | Artibeus jamaicensis | Jamacian fruit-eating bat | 1. Zoonomia | GCA_004027435.1 | LC |
| CHIROPTERA | Phyllostomidae | Carollia perspicillata | Seba's short-tailed bat | 1. Zoonomia | GCA_004027735.1 | LC |
| CHIROPTERA | Phyllostomidae | Desmodus rotundus | Common vampire bat | 2. Existing assembly | GCA_002940915.2 | LC |
| CHIROPTERA | Phyllostomidae | Micronycteris hirsuta | Hairy big-eared bat | 1. Zoonomia | GCA_004026765.1 | LC |
| CHIROPTERA | Phyllostomidae | Tonatia saurophila | Stripe-headed round-eared bat | 1. Zoonomia | GCA_004024845.1 | LC |
| CHIROPTERA | Pteropodidae | Eidolon helvum | Straw-colored fruit bat | 2. Existing assembly | GCA_000465285.1 | NT |
| CHIROPTERA | Pteropodidae | Macroglossus sobrinus | Long-tongued fruit bat | 1. Zoonomia | GCA_004027375.1 | LC |
| CHIROPTERA | Pteropodidae | Pteropus alecto | Black flying fox | 2. Existing assembly | GCF_000325575.1 | LC |
| CHIROPTERA | Pteropodidae | Pteropus vampyrus | Large flying fox | 2. Existing assembly | GCF_000151845.1 | NT |
| CHIROPTERA | Pteropodidae | Rousettus aegyptiacus | Egyptian fruit bat | 1. Zoonomia | GCA_004024865.1 | LC |
| CHIROPTERA | Rhinolophidae | Rhinolophus sinicus | Chinese rufous horseshoe bat | 2. Existing assembly | GCA_001888835.1 | LC |
| CHIROPTERA | Vespertilionidae | Eptesicus fuscus | Big brown bat | 2. Existing assembly | GCF_000308155.1 | LC |
| CHIROPTERA | Vespertilionidae | Lasiurus borealis | Eastern red bat | 1. Zoonomia | GCA_004026805.1 | LC |
| CHIROPTERA | Vespertilionidae | Miniopterus natalensis | Bats | 2. Existing assembly | GCF_001595765.1 | LC |
| CHIROPTERA | Vespertilionidae | Miniopterus schreibersii | Common bent-wing bat | 1. Zoonomia | GCA_004026525.1 | NT |
| CHIROPTERA | Vespertilionidae | Murina feae | Ashy-gray tube-nosed bat | 1. Zoonomia | GCA_004026665.1 | LC |
| CHIROPTERA | Vespertilionidae | Myotis brandtii | Brandt's bat | 2. Existing assembly | GCF_000412655.1 | LC |
| CHIROPTERA | Vespertilionidae | Myotis davidii | Bats | 2. Existing assembly | GCF_000327345.1 | LC |
| CHIROPTERA | Vespertilionidae | Myotis lucifugus | Little brown bat | 2. Existing assembly | GCF_000147115.1 | LC |
| CHIROPTERA | Vespertilionidae | Myotis myotis | Greater mouse-eared bat | 1. Zoonomia | GCA_004026985.1 | LC |
| CHIROPTERA | Vespertilionidae | Pipistrellus pipistrellus | Common pipistrelle | 1. Zoonomia | GCA_004026625.1 | LC |
| CINGULATA | Dasypodidae | Chaetophractus vellerosus | Screaming hairy armadillo | 1. Zoonomia | GCA_004027955.1 | LC |
| CINGULATA | Dasypodidae | Dasypus novemcinctus | Nine-banded armadillo | 2. Existing assembly | GCF_000208655.1 | LC |
| CINGULATA | Dasypodidae | Tolypeutes matacus | Southern three-banded armadillo | 1. Zoonomia | GCA_004025125.1 | NT |
| DERMOPTERA | Cynocephalidae | Galeopterus variegatus | Sunda flying lemur | 1. Zoonomia | GCA_004027255.1 | LC |
| EULIPOTYPHLA | Erinaceidae | Erinaceus europaeus | Western european hedgehog | 2. Existing assembly | GCF_000296755.1 | LC |
| EULIPOTYPHLA | Solenodontidae | Solenodon paradoxus | Hispaniolan solenodon | 1. Zoonomia | GCA_004363575.1 | EN |
| EULIPOTYPHLA | Soricidae | Crocidura indochinensis | Indochinese shrew | 1. Zoonomia | GCA_004027635.1 | LC |
| EULIPOTYPHLA | Soricidae | Sorex araneus | European shrew | 2. Existing assembly | GCF_000181275.1 | LC |
| EULIPOTYPHLA | Talpidae | Condylura cristata | Star-nosed mole | 2. Existing assembly | GCF_000260355.1 | LC |
| EULIPOTYPHLA | Talpidae | Scalopus aquaticus | Eastern mole | 1. Zoonomia | GCA_004024925.1 | LC |
| EULIPOTYPHLA | Talpidae | Uropsilus gracilis | Gracile shrew-like mole | 1. Zoonomia | GCA_004024945.1 | LC |
| HYRACOIDEA | Procaviidae | Heterohyrax brucei | African yellow-spotted rock hyrax | 1. Zoonomia | GCA_004026845.1 | LC |
| HYRACOIDEA | Procaviidae | Procavia capensis | South African rock hyrax | 1. Zoonomia | GCA_004026925.1 | LC |
| LAGOMORPHA | Leporidae | Lepus americanus | Snowshoe hare | 1. Zoonomia | GCA_004026855.1 | LC |
| LAGOMORPHA | Leporidae | Oryctolagus cuniculus | Rabbit | 2. Existing assembly | GCF_000003625.3 | NT |
| LAGOMORPHA | Ochotonidae | Ochotona princeps | American pika | 2. Existing assembly | GCF_000292845.1 | LC |
| MACROSCELIDEA | Macroscelididae | Elephantulus edwardii | Cape elephant shrew | 1. Zoonomia | GCA_004027355.1 | LC |
| PERISSODACTYLA | Equidae | Equus asinus | Ass | 2. Existing assembly | GCF_001305755.1 | LC |
| PERISSODACTYLA | Equidae | Equus caballus | Horse | 2. Existing assembly | GCF_000002305.2 | LC |
| PERISSODACTYLA | Equidae | Equus przewalskii | Przewalski's horse | 2. Existing assembly | GCF_000696695.1 | EN |
| PERISSODACTYLA | Rhinocerotidae | Ceratotherium simum | Southern white rhinoceros | 2. Existing assembly | GCF_000283155.1 | NT |
| PERISSODACTYLA | Rhinocerotidae | Ceratotherium simum cottoni | Northern white rhino | 1. Zoonomia | GCA_004027795.1 | CR |
| PERISSODACTYLA | Rhinocerotidae | Dicerorhinus sumatrensis | Sumatran rhinoceros | 2. Existing assembly | GCA_002844835.1 | CR |
| PERISSODACTYLA | Rhinocerotidae | Diceros bicornis | Black rhinocerous | 1. Zoonomia | GCA_004027315.1 | CR |
| PERISSODACTYLA | Tapiridae | Tapirus indicus | Malayan tapir | 1. Zoonomia | GCA_004024905.1 | EN |
| PERISSODACTYLA | Tapiridae | Tapirus terrestris | South American tapir | 1. Zoonomia | GCA_004025025.1 | VU |
| PHOLIDOTA | Manidae | Manis javanica | Malayan pangolin | 2. Existing assembly | GCF_001685135.1 | CR |
| PHOLIDOTA | Manidae | Manis pentadactyla | Chinese pangolin | 2. Existing assembly | GCA_000738955.1 | CR |
| PILOSA | Megalonychidae | Choloepus didactylus | Linnaeus's two toed sloth | 1. Zoonomia | GCA_004027855.1 | LC |
| PILOSA | Megalonychidae | Choloepus hoffmanni | Hoffmann's two-fingered sloth | 2. Existing assembly | GCA_000164785.2 | LC |
| PILOSA | Myrmecophagidae | Myrmecophaga tridactyla | Giant anteater | 1. Zoonomia | GCA_004026745.1 | VU |
| PILOSA | Myrmecophagidae | Tamandua tetradactyla | Southern tamandua | 1. Zoonomia | GCA_004025105.1 | LC |
| PRIMATES | Aotidae | Aotus nancymaae | Ma's night monkey | 2. Existing assembly | GCA_000952055.2 | VU |
| PRIMATES | Atelidae | Alouatta palliata mexicana | Mexican howler monkey | 1. Zoonomia | GCA_004027835.1 | CR |
| PRIMATES | Atelidae | Ateles geoffroyi | Geoffroy's spider monkey | 1. Zoonomia | GCA_004024785.1 | EN |
| PRIMATES | Cebidae | Callithrix jacchus | White-tufted-ear marmoset | 2. Existing assembly | GCA_002754865.1 | LC |
| PRIMATES | Cebidae | Cebus albifrons | White-fronted capuchin | 1. Zoonomia | GCA_004027755.1 | LC |
| PRIMATES | Cebidae | Cebus capucinus | White-faced sapajou | 2. Existing assembly | GCF_001604975.1 | LC |
| PRIMATES | Cebidae | Saguinus imperator | Emperor tamarin | 1. Zoonomia | GCA_004024885.1 | LC |
| PRIMATES | Cebidae | Saimiri boliviensis | Bolivian squirrel monkey | 2. Existing assembly | GCF_000235385.1 | LC |
| PRIMATES | Cercopithecidae | Cercocebus atys | Sooty mangabey | 2. Existing assembly | GCF_000955945.1 | NT |
| PRIMATES | Cercopithecidae | Cercopithecus neglectus | De brazza's monkey | 1. Zoonomia | GCA_004027615.1 | LC |
| PRIMATES | Cercopithecidae | Chlorocebus sabaeus | Green monkey | 2. Existing assembly | GCF_000409795.2 | LC |
| PRIMATES | Cercopithecidae | Colobus angolensis | Angolan colobus | 2. Existing assembly | GCF_000951035.1 | VU |
| PRIMATES | Cercopithecidae | Erythrocebus patas | Patas monkey | 1. Zoonomia | GCA_004027335.1 | LC |
| PRIMATES | Cercopithecidae | Macaca fascicularis | Crab-eating macaque | 2. Existing assembly | GCF_000364345.1 | DD |
| PRIMATES | Cercopithecidae | Macaca mulatta | Rhesus monkey | 2. Existing assembly | GCF_000772875.2 | LC |
| PRIMATES | Cercopithecidae | Macaca nemestrina | Pig-tailed macaque | 2. Existing assembly | GCF_000956065.1 | VU |
| PRIMATES | Cercopithecidae | Mandrillus leucophaeus | Drill | 2. Existing assembly | GCF_000951045.1 | EN |
| PRIMATES | Cercopithecidae | Nasalis larvatus | Proboscis monkey | 1. Zoonomia | GCA_004027105.1 | EN |
| PRIMATES | Cercopithecidae | Papio anubis | Olive baboon | 2. Existing assembly | GCA_000264685.2 | LC |
| PRIMATES | Cercopithecidae | Piliocolobus tephrosceles | Ugandan red colobus | 2. Existing assembly | GCA_002776525.1 | EN |
| PRIMATES | Cercopithecidae | Pygathrix nemaeus | Red-shanked douc | 1. Zoonomia | GCA_004024825.1 | EN |
| PRIMATES | Cercopithecidae | Rhinopithecus bieti | Black snub-nosed monkey | 2. Existing assembly | GCF_001698545.1 | EN |
| PRIMATES | Cercopithecidae | Rhinopithecus roxellana | Golden snub-nosed monkey | 2. Existing assembly | GCF_000769185.1 | EN |
| PRIMATES | Cercopithecidae | Semnopithecus entellus | Northern Plains gray langur | 1. Zoonomia | GCA_004025065.1 | LC |
| PRIMATES | Cheirogaleidae | Cheirogaleus medius | Fat-tailed dwarf lemur | 1. Zoonomia | GCA_004024725.1 | LC |
| PRIMATES | Cheirogaleidae | Microcebus murinus | Gray mouse lemur | 2. Existing assembly | GCA_000165445.3 | LC |
| PRIMATES | Cheirogaleidae | Mirza coquereli | Coquerel's giant mouse lemur | 1. Zoonomia | GCA_004024645.1 | EN |
| PRIMATES | Daubentoniidae | Daubentonia madagascariensis | Aye-aye | 1. Zoonomia | GCA_004027145.1 | EN |
| PRIMATES | Galagidae | Otolemur garnettii | Small-eared galago | 2. Existing assembly | GCF_000181295.1 | LC |
| PRIMATES | Hominidae | Gorilla gorilla | Western lowland gorilla | 2. Existing assembly | GCA_900006655.3 | CR |
| PRIMATES | Hominidae | Homo sapiens | Human | 2. Existing assembly | GCA_000001405.27 | LC |
| PRIMATES | Hominidae | Pan paniscus | Pygmy chimpanzee | 2. Existing assembly | GCF_000258655.2 | EN |
| PRIMATES | Hominidae | Pan troglodytes | Chimpanzee | 2. Existing assembly | GCA_002880755.3 | EN |
| PRIMATES | Hominidae | Pongo abelii | Sumatran orangutan | 2. Existing assembly | GCA_002880775.3 | CR |
| PRIMATES | Hylobatidae | Nomascus leucogenys | Northern white-cheeked gibbon | 2. Existing assembly | GCF_000146795.2 | CR |
| PRIMATES | Indridae | Indri indri | Indri | 1. Zoonomia | GCA_004363605.1 | CR |
| PRIMATES | Indridae | Propithecus coquereli | Coquerel's sifaka | 2. Existing assembly | GCF_000956105.1 | EN |
| PRIMATES | Lemuridae | Eulemur flavifrons | Sclater's lemur | 2. Existing assembly | GCA_001262665.1 | CR |
| PRIMATES | Lemuridae | Eulemur fulvus | Common brown lemur | 1. Zoonomia | GCA_004027275.1 | NT |
| PRIMATES | Lemuridae | Lemur catta | Ring tailed lemur | 1. Zoonomia | GCA_004024665.1 | EN |
| PRIMATES | Lorisidae | Nycticebus coucang | Sunda slow loris | 1. Zoonomia | GCA_004027815.1 | VU |
| PRIMATES | Pitheciidae | Callicebus donacophilus | White-eared titi | 1. Zoonomia | GCA_004027715.1 | LC |
| PRIMATES | Pitheciidae | Pithecia pithecia | White-faced saki | 1. Zoonomia | GCA_004026645.1 | LC |
| PROBOSCIDEA | Elephantidae | Loxodonta Africana | African savanna elephant | 2. Existing assembly | GCF_000001905.1 | VU |
| RODENTIA | Aplodontiidae | Aplodontia rufa | Mountain beaver | 1. Zoonomia | GCA_004027875.1 | LC |
| RODENTIA | Bathyergidae | Fukomys damarensis | Damara mole-rat | 2. Existing assembly | GCF_000743615.1 | LC |
| RODENTIA | Bathyergidae | Heterocephalus glaber | Naked mole-rat | 2. Existing assembly | GCF_000247695.1 | LC |
| RODENTIA | Capromyidae | Capromys pilorides | Desmarest's hutia | 1. Zoonomia | GCA_004027915.1 | LC |
| RODENTIA | Castoridae | Castor canadensis | North American beaver | 1. Zoonomia | GCA_004027675.1 | LC |
| RODENTIA | Caviidae | Cavia aperea | Brazilian guinea pig | 2. Existing assembly | GCA_000688575.1 | LC |
| RODENTIA | Caviidae | Cavia porcellus | Domestic guinea pig | 2. Existing assembly | GCF_000151735.1 | LC |
| RODENTIA | Caviidae | Cavia tschudii | Montane guinea pig | 1. Zoonomia | GCA_004027695.1 | LC |
| RODENTIA | Caviidae | Dolichotis patagonum | Patagonian mara | 1. Zoonomia | GCA_004027295.1 | NT |
| RODENTIA | Caviidae | Hydrochoerus hydrochaeris | Capybara | 1. Zoonomia | GCA_004027455.1 | LC |
| RODENTIA | Chinchillidae | Chinchilla lanigera | Long-tailed chinchilla | 2. Existing assembly | GCF_000276665.1 | EN |
| RODENTIA | Cricetidae | Ellobius lutescens | Transcaucasian mole vole | 2. Existing assembly | GCA_001685075.1 | LC |
| RODENTIA | Cricetidae | Ellobius talpinus | Northern mole vole | 2. Existing assembly | GCA_001685095.1 | LC |
| RODENTIA | Cricetidae | Mesocricetus auratus | Golden hamster | 2. Existing assembly | GCF_000349665.1 | VU |
| RODENTIA | Cricetidae | Microtus ochrogaster | Prairie vole | 2. Existing assembly | GCF_000317375.1 | LC |
| RODENTIA | Cricetidae | Ondatra zibethicus | Muskrat | 1. Zoonomia | GCA_004026605.1 | LC |
| RODENTIA | Cricetidae | Onychomys torridus | Scorpion mouse | 1. Zoonomia | GCA_004026725.1 | LC |
| RODENTIA | Cricetidae | Peromyscus maniculatus | Prairie deer mouse | 2. Existing assembly | GCF_000500345.1 | LC |
| RODENTIA | Cricetidae | Sigmodon hispidus | Hispid cotton rat | 1. Zoonomia | GCA_004025045.1 | LC |
| RODENTIA | Ctenodactylidae | Ctenodactylus gundi | Common gundi | 1. Zoonomia | GCA_004027205.1 | LC |
| RODENTIA | Ctenomyidae | Ctenomys sociabilis | Social tuco-tuco | 1. Zoonomia | GCA_004027165.1 | CR |
| RODENTIA | Cuniculidae | Cuniculus paca | Lowland paca | 1. Zoonomia | GCA_004365215.1 | LC |
| RODENTIA | Dasyproctidae | Dasyprocta punctata | Central American agouti | 1. Zoonomia | GCA_004363535.1 | LC |
| RODENTIA | Dinomyidae | Dinomys branickii | Pacarana | 1. Zoonomia | GCA_004027595.1 | LC |
| RODENTIA | Dipodidae | Allactaga bullata | Gobi jerboa | 1. Zoonomia | GCA_004027895.1 | LC |
| RODENTIA | Dipodidae | Jaculus jaculus | Lesser egyptian jerboa | 2. Existing assembly | GCF_000280705.1 | LC |
| RODENTIA | Dipodidae | Zapus hudsonius | Meadow jumping mouse | 1. Zoonomia | GCA_004024765.1 | LC |
| RODENTIA | Gliridae | Glis glis | Edible dormouse | 1. Zoonomia | GCA_004027185.1 | LC |
| RODENTIA | Gliridae | Graphiurus murinus | Woodland doormouse | 1. Zoonomia | GCA_004027655.1 | LC |
| RODENTIA | Gliridae | Muscardinus avellanarius | Hazel dormouse | 1. Zoonomia | GCA_004027005.1 | LC |
| RODENTIA | Heteromyidae | Dipodomys ordii | Ord's kangaroo rat | 2. Existing assembly | GCF_000151885.1 | LC |
| RODENTIA | Heteromyidae | Dipodomys stephensi | Stephen's kangaroo rat | 1. Zoonomia | GCA_004024685.1 | VU |
| RODENTIA | Heteromyidae | Perognathus longimembris pacificus | Pacific pocket mouse | 1. Zoonomia | GCA_004363475.1 | LC |
| RODENTIA | Hystricidae | Hystrix cristata | Northern crested porcupine | 1. Zoonomia | GCA_004026905.1 | LC |
| RODENTIA | Muridae | Acomys cahirinus | Cairo spiny mouse | 1. Zoonomia | GCA_004027535.1 | LC |
| RODENTIA | Muridae | Meriones unguiculatus | Mongolian jird | 1. Zoonomia | GCA_004026785.1 | LC |
| RODENTIA | Muridae | Mus caroli | Ryukyu mouse | 2. Existing assembly | GCA_900094665.2 | LC |
| RODENTIA | Muridae | Mus musculus | House mouse | 2. Existing assembly | GCF_000001635.26 | LC |
| RODENTIA | Muridae | Mus pahari | Shrew mouse | 2. Existing assembly | GCA_900095145.2 | LC |
| RODENTIA | Muridae | Mus spretus | Western wild mouse | 2. Existing assembly | GCA_001624865.1 | LC |
| RODENTIA | Muridae | Psammomys obesus | Fat sand rat | 2. Existing assembly | GCA_002215935.1 | LC |
| RODENTIA | Muridae | Rattus norvegicus | Norway rat | 2. Existing assembly | GCF_000001895.5 | LC |
| RODENTIA | Myocastoridae | Myocastor coypus | Coypu | 1. Zoonomia | GCA_004027025.1 | LC |
| RODENTIA | Nesomyidae | Cricetomys gambianus | Gambian pouched rat | 1. Zoonomia | GCA_004027575.1 | LC |
| RODENTIA | Nesomyidae | Cricetulus griseus | Chinese hamster | 2. Existing assembly | GCA_900186095.1 | LC |
| RODENTIA | Octodontidae | Octodon degus | Degu | 2. Existing assembly | GCF_000260255.1 | LC |
| RODENTIA | Petromuridae | Petromus typicus | Dassie rat | 1. Zoonomia | GCA_004026965.1 | LC |
| RODENTIA | Sciuridae | Ictidomys tridecemlineatus | Thirteen-lined ground squirrel | 2. Existing assembly | GCF_000236235.1 | LC |
| RODENTIA | Sciuridae | Marmota marmota | Alpine marmot | 2. Existing assembly | GCF_001458135.1 | LC |
| RODENTIA | Sciuridae | Spermophilus dauricus | Daurian ground squirrel | 2. Existing assembly | GCA_002406435.1 | LC |
| RODENTIA | Sciuridae | Xerus inauris | Cape ground squirrel | 1. Zoonomia | GCA_004024805.1 | LC |
| RODENTIA | Spalacidae | Nannospalax galili | Upper galilee mountains blind mole rat | 2. Existing assembly | GCF_000622305.1 | DD |
| RODENTIA | Thryonomyidae | Thryonomys swinderianus | Greater cane rat | 1. Zoonomia | GCA_004025085.1 | LC |
| SCANDENTIA | Tupaiidae | Tupaia belangeri chinensis | Northern tree shrew | 2. Existing assembly | GCF_000334495.1 | LC |
| SCANDENTIA | Tupaiidae | Tupaia tana | Large treeshrew | 1. Zoonomia | GCA_004365275.1 | LC |
| SIRENIA | Trichechidae | Trichechus manatus | Florida manatee | 2. Existing assembly | GCF_000243295.1 | EN |
| TUBULIDENTATA | Orycteropodidae | Orycteropus afer | Aardvark | 1. Zoonomia | GCA_004365145.1 | LC |
| CETARTIODACTYLA | Iniidae | Pontoporia blainvillei | La plata dolphin | 3. Zoonomia (not in alignment) | GCA_004363935.1 | VU |
| CHIROPTERA | Phyllostomidae | Macrotus californicus | California leaf-nosed bat | 3. Zoonomia (not in alignment) | GCA_007922815.1 | LC |
| CHIROPTERA | Rhinolophidae | Rhinolophus ferrumequinum | Greater horseshoe bat | 3. Zoonomia (not in alignment) | GCA_007922735.1 | LC |
| CHIROPTERA | Vespertilionidae | Antrozous pallidus | Pallid bat | 3. Zoonomia (not in alignment) | GCA_007922775.1 | LC |
| CHIROPTERA | Vespertilionidae | Nycticeius humeralis | Egyptian slit-faced bat | 3. Zoonomia (not in alignment) | GCA_007922795.1 | LC |
| PHOLIDOTA | Manidae | Manis tricuspis | Tree pangolin | 3. Zoonomia (not in alignment) | GCA_004765945.1 | VU |
| PILOSA | Bradypodidae | Bradypus variegatus | Brown-throated sloth | 3. Zoonomia (not in alignment) | GCA_004027775.1 | LC |
| RODENTIA | Pedetidae | Pedetes capensis | South African springhare | 3. Zoonomia (not in alignment) | GCA_007922755.1 | LC |
| RODENTIA | Spalacidae | Rhizomys pruinosus | Hoary bamboo rat | 3. Zoonomia (not in alignment) | GCA_004026225.1 | LC |